Does Atlassian Rovo / Atlassian Intelligence (Confluence, Jira) sign a BAA?

Only on some plans or setups

Atlassian signs a BAA for Standard, Premium and Enterprise plans of Jira, Jira Service Management, Jira Product Discovery and Confluence. It says Rovo Chat, Agents, Search and in-app AI in those apps fall under that BAA once Atlassian Support provisions Rovo for the HIPAA site. The Rovo MCP server, CLI, browser extension and mobile/desktop apps are excluded.

Based on 5 sources, all from Atlassian unless marked.

Not fully covered by the BAA: Rovo MCP server, Rovo CLI, Rovo browser extension, Rovo mobile and desktop apps; Trial or early-access AI features and third-party apps.

Business associate
Atlassian
Tool
Atlassian Rovo / Atlassian Intelligence (Confluence, Jira)
Plans with a BAA
Standard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence); Enterprise
Checked
Some plans only
Atlassian signs only for the plans listed.

By plan

PlanBAAHow to get itConditions
Free / trialNo BAANot offeredAtlassian says free and trial plans cannot sign BAAs.[1],[2]
Standard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence)Signs a BAAAccept or sign onlineAn org admin starts the BAA under Atlassian Administration > Security > Data protection > HIPAA compliance > Sign a BAA, and the signatory gets it by email (90 days to sign). After signing, tag the apps as HIPAA and follow the HIPAA Implementation Guide before uploading PHI. To use Rovo, ask Atlassian Support to provision it for the HIPAA site.[3],[1],[2],[4]
EnterpriseSigns a BAAThrough salesEnterprise customers sign the BAA through their Atlassian representative instead of the self-serve form. The same configuration and Rovo provisioning steps apply.[3],[2]
Atlassian Government CloudNo BAANot offeredAtlassian says the BAA process and HIPAA Rovo provisioning are not available for Government Cloud.[3],[2]

Are the AI features covered?

Vendors often sign a BAA for the core product but leave some AI features out. Here is what Atlassian says about each one.

AI featureUnder the BAADetails
Rovo ChatStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseCoveredAtlassian lists it as HIPAA-eligible under its existing BAA on HIPAA-enabled sites, once Support has provisioned Rovo.[3],[1]
Rovo AgentsStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseCoveredAtlassian lists Rovo Agents as HIPAA-eligible. Rovo cannot write to Atlassian apps that are not HIPAA-enabled, or to external systems through third-party connectors.[3]
Rovo SearchStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseCoveredAtlassian lists Rovo Search across its apps as HIPAA-eligible.[3]
In-app AI in Jira, Confluence, JSM and Jira Product Discovery (formerly Atlassian Intelligence)Standard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseCoveredAtlassian lists in-app AI experiences in these four apps as HIPAA-eligible. The HIPAA pages do not use the name 'Atlassian Intelligence'.[3],[1]
Rovo web searchStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseNot statedThe HIPAA Implementation Guide suggests considering turning web search off, because search parameters may go to the destination site's systems. Atlassian does not say outright whether it is covered.[1]
Rovo MCP server, Rovo CLI, Rovo browser extension, Rovo mobile and desktop appsStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseExcludedAtlassian names these as not HIPAA-compliant for now. It says the list is not exhaustive.[3],[1]
Trial or early-access AI features and third-party appsStandard / Premium (Jira, Jira Service Management, Jira Product Discovery, Confluence), EnterpriseExcludedTrial and early-access features are not automatically covered. Third-party products need their own BAA, and the Atlassian BAA excludes them.[1],[5]

Workspace and collaboration AI that offer a BAA

All BAA-ready alternatives to Atlassian Rovo / Atlassian Intelligence (Confluence, Jira)

Sources

  1. The HIPAA Implementation GuideAtlassian, Help center. Checked Oct 11, 2026.
  2. Sign a Business Associate Agreement (BAA)Atlassian, Help center. Checked Oct 11, 2026.
  3. Use Rovo for HIPAA organizationsAtlassian, Help center. Checked Oct 11, 2026.
  4. Atlassian HIPAA compliance resourcesAtlassian, Trust center. Checked Oct 11, 2026.
  5. Atlassian Business Associate AgreementAtlassian, Legal terms. Checked Oct 11, 2026.

A signed BAA is necessary but not sufficient for HIPAA compliance, which also depends on configuration, access controls, and your own policies. Verdicts summarize the vendor's own published terms as of the date checked; confirm with the vendor and your counsel before sending protected health information. Not legal advice.